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Grant Details

Grant Number: 1R01CA164964-01A1 Interpret this number
Primary Investigator: Ahn, Jiyoung
Organization: New York University School Of Medicine
Project Title: Prospective Study of Human Oral Microbiome and Pancreatic Cancer Risk
Fiscal Year: 2014


Abstract

DESCRIPTION (provided by applicant): We found that poor oral health status is associated with increased risk of pancreatic cancer. Because poor oral health status is due to oral bacterial dysbiosis, we hypothesize that oral microbiota potentiate pancreas carcinogenesis. Supporting this, recent cohort studies reported that individuals with greater circulating antibodies to multipe oral bacteria have a greater risk of pancreatic cancer. Directly assessing oral microbiome from high-throughput genomic sequencing of oral samples in our recent case-control study, we found that specific gram-negative oral bacteria are associated with 3-fold increased risk of pancreatic cancer. We also showed that these bacteria are present in the human pancreatic duct and showed in animal experiments that oral microbiota access the pancreas and have oncogenic effects via inflammation at the organ site. Because case-control studies are limited for causal inference, a current critical research gap is the lack of prospective confirmation of the link between pre-diagnostic oral microbiome and pancreatic cancer risk. A second research gap is the limited understanding of the comprehensive functional roles of the microbiota and the human host response. The overarching goals of this study are to identify oral microbiota associated with subsequent risk of pancreas cancer and to improve our understanding of the role of the microbiome in host responses potentially related to pancreatic tumorigenesis. Our specific aims are: 1) to test whether oral microbiome is associated with subsequent risk of pancreatic cancer in a nested case-control study and 2) to identify metabolically active bacterial function in the human pancreas and correlate these bacterial activities with expression of human inflammatory signaling pathways. Strengths of this study include a large prospective study design, with oral samples collected prior to cancer development, and state-of-art genomic microbiome and transcriptome assays for assessing oral and pancreas microbiota and related functions. This study is the first study of oral and pancreas microbiome and pancreatic cancer risk. Pancreatic cancer is highly lethal and little is known about ways to detect and prevent this disease. We expect to identify specific oral bacteria associated with risk of pancreas cancer and to identify metabolically active bacterial functions in the pancreas and related host pancreatic inflammatory responses. These outcomes will expand our current limited knowledge on the causes of pancreatic cancer, will help to identify people at high risk for this disease, and may lead to microbial-based prophylactic preventions for pancreatic cancer. Thus, findings may help to rapidly advance our ability to reduce the burden of this highly fatal disease.



Publications

Bacteroides vulgatus and Bacteroides dorei predict immune-related adverse events in immune checkpoint blockade treatment of metastatic melanoma.
Authors: Usyk M. , Pandey A. , Hayes R.B. , Moran U. , Pavlick A. , Osman I. , Weber J.S. , Ahn J. .
Source: Genome medicine, 2021-10-13; 13(1), p. 160.
EPub date: 2021-10-13.
PMID: 34641962
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A Link Between Plasma Microbial Translocation, Microbiome, and Autoantibody Development in First-Degree Relatives of Systemic Lupus Erythematosus Patients.
Authors: Ogunrinde E. , Zhou Z. , Luo Z. , Alekseyenko A. , Li Q.Z. , Macedo D. , Kamen D.L. , Oates J.C. , Gilkeson G.S. , Jiang W. .
Source: Arthritis & rheumatology (Hoboken, N.J.), 2019 Nov; 71(11), p. 1858-1868.
EPub date: 2019-09-27.
PMID: 31106972
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Relating the gut metagenome and metatranscriptome to immunotherapy responses in melanoma patients.
Authors: Peters B.A. , Wilson M. , Moran U. , Pavlick A. , Izsak A. , Wechter T. , Weber J.S. , Osman I. , Ahn J. .
Source: Genome medicine, 2019-10-09; 11(1), p. 61.
EPub date: 2019-10-09.
PMID: 31597568
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Progesterone decreases gut permeability through upregulating occludin expression in primary human gut tissues and Caco-2 cells.
Authors: Zhou Z. , Bian C. , Luo Z. , Guille C. , Ogunrinde E. , Wu J. , Zhao M. , Fitting S. , Kamen D.L. , Oates J.C. , et al. .
Source: Scientific reports, 2019-06-10; 9(1), p. 8367.
EPub date: 2019-06-10.
PMID: 31182728
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The Microbiome in Lung Cancer Tissue and Recurrence-Free Survival.
Authors: Peters B.A. , Hayes R.B. , Goparaju C. , Reid C. , Pass H.I. , Ahn J. .
Source: Cancer epidemiology, biomarkers & prevention : a publication of the American Association for Cancer Research, cosponsored by the American Society of Preventive Oncology, 2019 Apr; 28(4), p. 731-740.
EPub date: 2019-02-07.
PMID: 30733306
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Association of dietary fibre intake and gut microbiota in adults.
Authors: Lin D. , Peters B.A. , Friedlander C. , Freiman H.J. , Goedert J.J. , Sinha R. , Miller G. , Bernstein M.A. , Hayes R.B. , Ahn J. .
Source: The British journal of nutrition, 2018 Nov; 120(9), p. 1014-1022.
PMID: 30355393
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Distinct systemic microbiome and microbial translocation are associated with plasma level of anti-CD4 autoantibody in HIV infection.
Authors: Xu W. , Luo Z. , Alekseyenko A.V. , Martin L. , Wan Z. , Ling B. , Qin Z. , Heath S.L. , Maas K. , Cong X. , et al. .
Source: Scientific reports, 2018-08-27; 8(1), p. 12863.
EPub date: 2018-08-27.
PMID: 30150778
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Association of Coffee and Tea Intake with the Oral Microbiome: Results from a Large Cross-Sectional Study.
Authors: Peters B.A. , McCullough M.L. , Purdue M.P. , Freedman N.D. , Um C.Y. , Gapstur S.M. , Hayes R.B. , Ahn J. .
Source: Cancer epidemiology, biomarkers & prevention : a publication of the American Association for Cancer Research, cosponsored by the American Society of Preventive Oncology, 2018 Jul; 27(7), p. 814-821.
EPub date: 2018-04-27.
PMID: 29703763
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A taxonomic signature of obesity in a large study of American adults.
Authors: Peters B.A. , Shapiro J.A. , Church T.R. , Miller G. , Trinh-Shevrin C. , Yuen E. , Friedlander C. , Hayes R.B. , Ahn J. .
Source: Scientific reports, 2018-06-27; 8(1), p. 9749.
EPub date: 2018-06-27.
PMID: 29950689
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Quantification of Human Microbiome Stability Over 6 Months: Implications for Epidemiologic Studies.
Authors: Sinha R. , Goedert J.J. , Vogtmann E. , Hua X. , Porras C. , Hayes R. , Safaeian M. , Yu G. , Sampson J. , Ahn J. , et al. .
Source: American journal of epidemiology, 2018-06-01; 187(6), p. 1282-1290.
PMID: 29608646
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Drinking alcohol is associated with variation in the human oral microbiome in a large study of American adults.
Authors: Fan X. , Peters B.A. , Jacobs E.J. , Gapstur S.M. , Purdue M.P. , Freedman N.D. , Alekseyenko A.V. , Wu J. , Yang L. , Pei Z. , et al. .
Source: Microbiome, 2018-04-24; 6(1), p. 59.
EPub date: 2018-04-24.
PMID: 29685174
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Association of Oral Microbiome With Risk for Incident Head and Neck Squamous Cell Cancer.
Authors: Hayes R.B. , Ahn J. , Fan X. , Peters B.A. , Ma Y. , Yang L. , Agalliu I. , Burk R.D. , Ganly I. , Purdue M.P. , et al. .
Source: JAMA oncology, 2018-03-01; 4(3), p. 358-365.
PMID: 29327043
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Comparison of the oral microbiome in mouthwash and whole saliva samples.
Authors: Fan X. , Peters B.A. , Min D. , Ahn J. , Hayes R.B. .
Source: PloS one, 2018; 13(4), p. e0194729.
EPub date: 2018-04-11.
PMID: 29641531
Related Citations

Human oral microbiome and prospective risk for pancreatic cancer: a population-based nested case-control study.
Authors: Fan X. , Alekseyenko A.V. , Wu J. , Peters B.A. , Jacobs E.J. , Gapstur S.M. , Purdue M.P. , Abnet C.C. , Stolzenberg-Solomon R. , Miller G. , et al. .
Source: Gut, 2018 Jan; 67(1), p. 120-127.
EPub date: 2016-10-14.
PMID: 27742762
Related Citations

Oral Microbiome Composition Reflects Prospective Risk for Esophageal Cancers.
Authors: Peters B.A. , Wu J. , Pei Z. , Yang L. , Purdue M.P. , Freedman N.D. , Jacobs E.J. , Gapstur S.M. , Hayes R.B. , Ahn J. .
Source: Cancer research, 2017-12-01; 77(23), p. 6777-6787.
PMID: 29196415
Related Citations

The oral fungal mycobiome: characteristics and relation to periodontitis in a pilot study.
Authors: Peters B.A. , Wu J. , Hayes R.B. , Ahn J. .
Source: BMC microbiology, 2017-07-12; 17(1), p. 157.
EPub date: 2017-07-12.
PMID: 28701186
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Phylogenic inference using alignment-free methods for applications in microbial community surveys using 16s rRNA gene.
Authors: Zhang Y. , Alekseyenko A.V. .
Source: PloS one, 2017; 12(11), p. e0187940.
EPub date: 2017-11-14.
PMID: 29136663
Related Citations

The gut microbiota in conventional and serrated precursors of colorectal cancer.
Authors: Peters B.A. , Dominianni C. , Shapiro J.A. , Church T.R. , Wu J. , Miller G. , Yuen E. , Freiman H. , Lustbader I. , Salik J. , et al. .
Source: Microbiome, 2016-12-30; 4(1), p. 69.
EPub date: 2016-12-30.
PMID: 28038683
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Cigarette smoking and the oral microbiome in a large study of American adults.
Authors: Wu J. , Peters B.A. , Dominianni C. , Zhang Y. , Pei Z. , Yang L. , Ma Y. , Purdue M.P. , Jacobs E.J. , Gapstur S.M. , et al. .
Source: The ISME journal, 2016 Oct; 10(10), p. 2435-46.
EPub date: 2016-03-25.
PMID: 27015003
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Fecal Microbiota, Fecal Metabolome, and Colorectal Cancer Interrelations.
Authors: Sinha R. , Ahn J. , Sampson J.N. , Shi J. , Yu G. , Xiong X. , Hayes R.B. , Goedert J.J. .
Source: PloS one, 2016; 11(3), p. e0152126.
EPub date: 2016-03-25.
PMID: 27015276
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TLR9 ligation in pancreatic stellate cells promotes tumorigenesis.
Authors: Zambirinis C.P. , Levie E. , Nguy S. , Avanzi A. , Barilla R. , Xu Y. , Seifert L. , Daley D. , Greco S.H. , Deutsch M. , et al. .
Source: The Journal of experimental medicine, 2015-11-16; 212(12), p. 2077-94.
EPub date: 2015-10-19.
PMID: 26481685
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Sex, body mass index, and dietary fiber intake influence the human gut microbiome.
Authors: Dominianni C. , Sinha R. , Goedert J.J. , Pei Z. , Yang L. , Hayes R.B. , Ahn J. .
Source: PloS one, 2015; 10(4), p. e0124599.
EPub date: 2015-04-15.
PMID: 25874569
Related Citations

Fecal metabolomics: assay performance and association with colorectal cancer.
Authors: Goedert J.J. , Sampson J.N. , Moore S.C. , Xiao Q. , Xiong X. , Hayes R.B. , Ahn J. , Shi J. , Sinha R. .
Source: Carcinogenesis, 2014 Sep; 35(9), p. 2089-96.
EPub date: 2014-07-18.
PMID: 25037050
Related Citations

Comparison of methods for fecal microbiome biospecimen collection.
Authors: Dominianni C. , Wu J. , Hayes R.B. , Ahn J. .
Source: BMC microbiology, 2014-04-23; 14, p. 103.
EPub date: 2014-04-23.
PMID: 24758293
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