Grant Details
Grant Number: |
5R01CA075971-11 Interpret this number |
Primary Investigator: |
Betensky, Rebecca |
Organization: |
Harvard School Of Public Health |
Project Title: |
Statistical Methods for Analysis of Failure Time Data |
Fiscal Year: |
2009 |
Abstract
DESCRIPTION (provided by applicant): The goal of this application is to develop statistical methods for the analysis of failure time data in the presence of missing diagnoses or classification, missing observation time and progression measurement, and missing segments of the target population. These types of missingness are not individual-specific, but rather are characteristic of the entire study population. That is, all subjects are missing a histologically-based diagnosis, or all subjects are missing continuous-valued, continuous-time measurements of progression, or all subjects of a certain type are missing from the study population. These three dimensions of population- wide missingness encompass a broad range of real problems that I have encountered in studies of brain tumors, schwannomas, Multiple Sclerosis (MS), and coronary heart disease (CHD). The brain tumor and schwannoma studies measure several histologic features, with the goal of refining diagnoses to be more prognostic for clinical outcomes. The MS study features a failure endpoint that is defined by a discrete time ordinal longitudinal process. This is common in many cancer studies, which have scored endpoints such as radiologic progression and performance status. The CHD study typifies an emerging common design in which prospective cohorts are sampled mid-study for genetic analysis. This is commonly done to investigate genetic associations with various cancers, as well. An array of statistical methods, including Bayesian and frequentist latent class models, transitional models for ordinal processes, and pseudo likelihood estimation for a biased sample, are used to address these problems. Relevance: This research aims to provide improved statistical methods for the design and analysis of clinical and laboratory studies of cancer. The methods may lead to faster discovery of cancer genes and effective treatments and to better understanding of disease progression through more efficient use of resources.
Publications
Nonparametric and semiparametric estimation with sequentially truncated survival data.
Authors: Betenksy R.A.
, Qian J.
, Hou J.
.
Source: Biometrics, 2022-04-15 00:00:00.0; , .
EPub date: 2022-04-15 00:00:00.0.
PMID: 35426133
Related Citations
Transformation model based regression with dependently truncated and independently censored data.
Authors: Qian J.
, Chiou S.H.
, Betensky R.A.
.
Source: Journal Of The Royal Statistical Society. Series C, Applied Statistics, 2022 Mar; 71(2), p. 395-416.
EPub date: 2022-01-17 00:00:00.0.
PMID: 35611001
Related Citations
Displaying survival of patient groups defined by covariate paths: Extensions of the Kaplan-Meier estimator.
Authors: Jay M.
, Betensky R.A.
.
Source: Statistics In Medicine, 2021-04-15 00:00:00.0; 40(8), p. 2024-2036.
EPub date: 2021-02-02 00:00:00.0.
PMID: 33530128
Related Citations
Transformation model estimation of survival under dependent truncation and independent censoring.
Authors: Chiou S.H.
, Austin M.D.
, Qian J.
, Betensky R.A.
.
Source: Statistical Methods In Medical Research, 2018-12-13 00:00:00.0; , p. 962280218817573.
EPub date: 2018-12-13 00:00:00.0.
PMID: 30543153
Related Citations
Permutation Tests for General Dependent Truncation.
Authors: Chiou S.H.
, Qian J.
, Mormino E.
, Betensky R.A.
, Alzheimer’s Disease Neuroimaging Initiative
, Australian Imaging Biomarkers Lifestyle Flagship Study of Aging
, Harvard Aging Brain Study
.
Source: Computational Statistics & Data Analysis, 2018 Dec; 128, p. 308-324.
EPub date: 2018-07-29 00:00:00.0.
PMID: 30613119
Related Citations
Hypothesis Tests for Neyman's Bias in Case-Control Studies.
Authors: Swanson D.M.
, Anderson C.D.
, Betensky R.A.
.
Source: Journal Of Applied Statistics, 2018; 45(11), p. 1956-1977.
EPub date: 2017-11-16 00:00:00.0.
PMID: 30250354
Related Citations
Biomarker validation with an imperfect reference: Issues and bounds.
Authors: Emerson S.C.
, Waikar S.S.
, Fuentes C.
, Bonventre J.V.
, Betensky R.A.
.
Source: Statistical Methods In Medical Research, 2017-01-01 00:00:00.0; , p. 962280216689806.
EPub date: 2017-01-01 00:00:00.0.
PMID: 28166709
Related Citations
Linear Regression With A Randomly Censored Covariate: Application To An Alzheimer's Study
Authors: Atem F.D.
, Qian J.
, Maye J.E.
, Johnson K.A.
, Betensky R.A.
.
Source: Journal Of The Royal Statistical Society. Series C, Applied Statistics, 2017; 66(2), p. 313-328.
PMID: 28239197
Related Citations
Cognitive Resilience In Clinical And Preclinical Alzheimer's Disease: The Association Of Amyloid And Tau Burden On Cognitive Performance
Authors: Rentz D.M.
, Mormino E.C.
, Papp K.V.
, Betensky R.A.
, Sperling R.A.
, Johnson K.A.
.
Source: Brain Imaging And Behavior, 2016-10-13 00:00:00.0; , .
PMID: 27738998
Related Citations
Multiple Imputation Of A Randomly Censored Covariate Improves Logistic Regression Analysis
Authors: Atem F.D.
, Qian J.
, Maye J.E.
, Johnson K.A.
, Betensky R.A.
.
Source: Journal Of Applied Statistics, 2016; 43(15), p. 2886-2896.
PMID: 27713593
Related Citations
An Optimal Wilcoxon-mann-whitney Test Of Mortality And A Continuous Outcome
Authors: Matsouaka R.A.
, Singhal A.B.
, Betensky R.A.
.
Source: Statistical Methods In Medical Research, 2016-01-01 00:00:00.0; , p. 962280216680524.
PMID: 27920364
Related Citations
Research Participant Compensation: A Matter Of Statistical Inference As Well As Ethics
Authors: Swanson D.M.
, Betensky R.A.
.
Source: Contemporary Clinical Trials, 2015 Nov; 45(Pt B), p. 265-9.
PMID: 26334678
Related Citations
Measures Of Follow-up In Time-to-event Studies: Why Provide Them And What Should They Be?
Authors: Betensky R.A.
.
Source: Clinical Trials (london, England), 2015 Aug; 12(4), p. 403-8.
PMID: 26025565
Related Citations
Computationally Simple Analysis Of Matched, Outcome-based Studies Of Ordinal Disease States
Authors: Betensky R.A.
, Szymonifka J.
, Lee E.Q.
, Nutt C.L.
, Batchelor T.T.
.
Source: Statistics In Medicine, 2015-07-30 00:00:00.0; 34(17), p. 2514-27.
PMID: 25900819
Related Citations
Power And Sample Size Calculations For The Wilcoxon-mann-whitney Test In The Presence Of Death-censored Observations
Authors: Matsouaka R.A.
, Betensky R.A.
.
Source: Statistics In Medicine, 2015-02-10 00:00:00.0; 34(3), p. 406-31.
PMID: 25393385
Related Citations
Synergistic effect of ß-amyloid and neurodegeneration on cognitive decline in clinically normal individuals.
Authors: Mormino E.C.
, Betensky R.A.
, Hedden T.
, Schultz A.P.
, Amariglio R.E.
, Rentz D.M.
, Johnson K.A.
, Sperling R.A.
.
Source: Jama Neurology, 2014 Nov; 71(11), p. 1379-85.
PMID: 25222039
Related Citations
Computationally Simple Estimation And Improved Efficiency For Special Cases Of Double Truncation
Authors: Austin M.D.
, Simon D.K.
, Betensky R.A.
.
Source: Lifetime Data Analysis, 2014 Jul; 20(3), p. 335-54.
PMID: 24347050
Related Citations
Amyloid and APOE ¿4 interact to influence short-term decline in preclinical Alzheimer disease.
Authors: Mormino E.C.
, Betensky R.A.
, Hedden T.
, Schultz A.P.
, Ward A.
, Huijbers W.
, Rentz D.M.
, Johnson K.A.
, Sperling R.A.
, Alzheimer's Disease Neuroimaging Initiative
, et al.
.
Source: Neurology, 2014-05-20 00:00:00.0; 82(20), p. 1760-7.
EPub date: 2014-05-20 00:00:00.0.
PMID: 24748674
Related Citations
Eliminating Bias Due To Censoring In Kendall's Tau Estimators For Quasi-independence Of Truncation And Failure
Authors: Austin M.D.
, Betensky R.A.
.
Source: Computational Statistics & Data Analysis, 2014-05-14 00:00:00.0; 73, p. 16-26.
PMID: 24505164
Related Citations
Assumptions Regarding Right Censoring In The Presence Of Left Truncation
Authors: Qian J.
, Betensky R.A.
.
Source: Statistics & Probability Letters, 2014-04-01 00:00:00.0; 87, p. 12-17.
PMID: 24683283
Related Citations
Variable Selection And Prediction Using A Nested, Matched Case-control Study: Application To Hospital Acquired Pneumonia In Stroke Patients
Authors: Qian J.
, Payabvash S.
, Kemmling A.
, Lev M.H.
, Schwamm L.H.
, Betensky R.A.
.
Source: Biometrics, 2014 Mar; 70(1), p. 153-63.
PMID: 24320930
Related Citations
Imperfect Gold Standards For Biomarker Evaluation
Authors: Waikar S.S.
, Betensky R.A.
, Emerson S.C.
, Bonventre J.V.
.
Source: Clinical Trials (london, England), 2013 Oct; 10(5), p. 696-700.
PMID: 24006246
Related Citations
Reply To Sabanés Bové And Held's "comment On Cai And Betensky (2003), On The Poisson Approximation For Hazard Regression"
Authors: Cai T.
, Betensky R.
.
Source: Biometrics, 2013 Sep; 69(3), p. 796.
PMID: 24073867
Related Citations
An Analysis Of Adaptive Design Variations On The Sequential Parallel Comparison Design For Clinical Trials
Authors: Mi M.Y.
, Betensky R.A.
.
Source: Clinical Trials (london, England), 2013 Apr; 10(2), p. 207-15.
PMID: 23283576
Related Citations
Estimating Time To Disease Progression Comparing Transition Models And Survival Methods--an Analysis Of Multiple Sclerosis Data
Authors: Mandel M.
, Mercier F.
, Eckert B.
, Chin P.
, Betensky R.A.
.
Source: Biometrics, 2013 Mar; 69(1), p. 225-34.
PMID: 23410536
Related Citations
Improved Design Of Prodromal Alzheimer's Disease Trials Through Cohort Enrichment And Surrogate Endpoints
Authors: Macklin E.A.
, Blacker D.
, Hyman B.T.
, Betensky R.A.
.
Source: Journal Of Alzheimer's Disease : Jad, 2013; 36(3), p. 475-86.
PMID: 23629586
Related Citations
Hospital Acquired Pneumonia Is Linked To Right Hemispheric Peri-insular Stroke
Authors: Kemmling A.
, Lev M.H.
, Payabvash S.
, Betensky R.A.
, Qian J.
, Masrur S.
, Schwamm L.H.
.
Source: Plos One, 2013; 8(8), p. e71141.
PMID: 23951094
Related Citations
Hazard Regression Models Of Early Mortality In Trauma Centers
Authors: Clark D.E.
, Qian J.
, Winchell R.J.
, Betensky R.A.
.
Source: Journal Of The American College Of Surgeons, 2012 Dec; 215(6), p. 841-9.
PMID: 23036828
Related Citations
Genetic Risk Factors In Parkinson's Disease: Single Gene Effects And Interactions Of Genotypes
Authors: Göbel A.
, Macklin E.A.
, Winkler S.
, Betensky R.A.
, Klein C.
, Lohmann K.
, Simon D.K.
.
Source: Journal Of Neurology, 2012 Nov; 259(11), p. 2503-5.
PMID: 22878430
Related Citations
The Distribution Of Survival Times After Injury
Authors: Clark,D.E.
, Qian,J.
, Sihler,K.C.
, Hallagan,L.D.
, Betensky,R.A.
.
Source: World Journal Of Surgery, 2012 Jul; 36(7), p. 1562-70.
PMID: 22402976
Related Citations
Supervised Bayesian latent class models for high-dimensional data.
Authors: Desantis S.M.
, Houseman E.A.
, Coull B.A.
, Nutt C.L.
, Betensky R.A.
.
Source: Statistics In Medicine, 2012-06-15 00:00:00.0; 31(13), p. 1342-60.
EPub date: 2012-06-15 00:00:00.0.
PMID: 22495652
Related Citations
Gain Of Chromosome Arm 1q In Atypical Meningioma Correlates With Shorter Progression-free Survival
Authors: Jansen,M.
, Mohapatra,G.
, Betensky,R.A.
, Keohane,C.
, Louis,D.N.
.
Source: Neuropathology And Applied Neurobiology, 2012 Apr; 38(2), p. 213-9.
PMID: 21988727
Related Citations
Application Of Futility Analysis To Refine Jitter Recordings In Myasthenia Gravis
Authors: Narayanaswami,P.
, Pantoja-Galicia,N.
, Betensky,R.A.
, Rutkove,S.B.
.
Source: Muscle & Nerve, 2012 Apr; 45(4), p. 486-91.
PMID: 22431080
Related Citations
Imperfect Gold Standards For Kidney Injury Biomarker Evaluation
Authors: Waikar,S.S.
, Betensky,R.A.
, Emerson,S.C.
, Bonventre,J.V.
.
Source: Journal Of The American Society Of Nephrology : Jasn, 2012 Jan; 23(1), p. 13-21.
PMID: 22021710
Related Citations
A Test For The Relationship Between A Time-varying Marker And Both Recovery And Progression With Missing Data
Authors: Schoenfeld,D.A.
, Rajicic,N.
, Ficociello,L.H.
, Finkelstein,D.M.
.
Source: Statistics In Medicine, 2011-03-30 00:00:00.0; 30(7), p. 718-24.
PMID: 21394748
Related Citations
Assessing Population Level Genetic Instability Via Moving Average
Authors: McDaniel S.
, Minnier J.
, Betensky R.A.
, Mohapatra G.
, Shen Y.
, Gusella J.F.
, Louis D.N.
, Cai T.
.
Source: Statistics In Biosciences, 2010 Dec; 2(2), p. 120-136.
PMID: 22866169
Related Citations
A Score Test For Association Of A Longitudinal Marker And An Event With Missing Data
Authors: Finkelstein,D.M.
, Wang,R.
, Ficociello,L.H.
, Schoenfeld,D.A.
.
Source: Biometrics, 2010 Sep; 66(3), p. 726-32.
PMID: 19754923
Related Citations
Remote Supervision Of Iv-tpa For Acute Ischemic Stroke By Telemedicine Or Telephone Before Transfer To A Regional Stroke Center Is Feasible And Safe
Authors: Pervez,M.A.
, Silva,G.
, Masrur,S.
, Betensky,R.A.
, Furie,K.L.
, Hidalgo,R.
, Lima,F.
, Rosenthal,E.S.
, Rost,N.
, Viswanathan,A.
, et al.
.
Source: Stroke; A Journal Of Cerebral Circulation, 2010 Jan; 41(1), p. e18-24.
PMID: 19910552
Related Citations
A Latent Class Model With Hidden Markov Dependence For Array Cgh Data
Authors: DeSantis,S.M.
, Houseman,E.A.
, Coull,B.A.
, Louis,D.N.
, Mohapatra,G.
, Betensky,R.A.
.
Source: Biometrics, 2009 Dec; 65(4), p. 1296-305.
PMID: 19397578
Related Citations
Analysis Of The Relationship Between Longitudinal Gene Expressions And Ordered Categorical Event Data
Authors: Rajicic N.
, Finkelstein D.M.
, Schoenfeld D.A.
, Inflammation and Host Response to Injury Research Program Investigators
.
Source: Statistics In Medicine, 2009-09-30 00:00:00.0; 28(22), p. 2817-32.
PMID: 19618375
Related Citations
Microbleeds Versus Macrobleeds: Evidence For Distinct Entities
Authors: Greenberg,S.M.
, Nandigam,R.N.
, Delgado,P.
, Betensky,R.A.
, Rosand,J.
, Viswanathan,A.
, Frosch,M.P.
, Smith,E.E.
.
Source: Stroke; A Journal Of Cerebral Circulation, 2009 Jul; 40(7), p. 2382-6.
PMID: 19443797
Related Citations
Analysis Of Familial Aggregation Studies With Complex Ascertainment Schemes
Authors: Matthews A.G.
, Finkelstein D.M.
, Betensky R.A.
.
Source: Statistics In Medicine, 2008-10-30 00:00:00.0; 27(24), p. 5076-92.
PMID: 18618413
Related Citations
Estimating Time-to-event From Longitudinal Ordinal Data Using Random-effects Markov Models: Application To Multiple Sclerosis Progression
Authors: Mandel,M.
, Betensky,R.A.
.
Source: Biostatistics (oxford, England), 2008 Oct; 9(4), p. 750-64.
PMID: 18424785
Related Citations
A Penalized Latent Class Model For Ordinal Data
Authors: Desantis,S.M.
, Houseman,E.A.
, Coull,B.A.
, Stemmer-Rachamimov,A.
, Betensky,R.A.
.
Source: Biostatistics (oxford, England), 2008 Apr; 9(2), p. 249-62.
PMID: 17626225
Related Citations
Simultaneous Confidence Intervals Based On The Percentile Bootstrap Approach
Authors: Mandel M.
, Betensky R.A.
.
Source: Computational Statistics & Data Analysis, 2008-01-10 00:00:00.0; 52(4), p. 2158-2165.
PMID: 19137059
Related Citations
Estimating Time To Event From Longitudinal Categorical Data: An Analysis Of Multiple Sclerosis Progression
Authors: Mandel M.
, Gauthier S.A.
, Guttmann C.R.
, Weiner H.L.
, Betensky R.A.
.
Source: Journal Of The American Statistical Association, 2007 Dec; 102(480), p. 1254-1266.
PMID: 19081806
Related Citations
Tests Of Association Under Misclassification: Application To Histological Sampling In Oncology
Authors: Betensky,R.A.
, Louis,D.N.
, Cairncross,J.G.
.
Source: Statistics In Medicine, 2007-11-20 00:00:00.0; 26(26), p. 4808-16.
PMID: 17476651
Related Citations
Predicting Short-term Disability In Multiple Sclerosis
Authors: Gauthier,S.A.
, Mandel,M.
, Guttmann,C.R.
, Glanz,B.I.
, Khoury,S.J.
, Betensky,R.A.
, Weiner,H.L.
.
Source: Neurology, 2007-06-12 00:00:00.0; 68(24), p. 2059-65.
PMID: 17562826
Related Citations
Multivariate Logistic Regression For Familial Aggregation In Age At Disease Onset
Authors: Matthews A.G.
, Finkelstein D.M.
, Betensky R.A.
.
Source: Lifetime Data Analysis, 2007 Jun; 13(2), p. 191-209.
PMID: 17410428
Related Citations
Testing goodness of fit of a uniform truncation model.
Authors: Mandel M.
, Betensky R.A.
.
Source: Biometrics, 2007 Jun; 63(2), p. 405-12.
PMID: 17688493
Related Citations