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Grant Details

Grant Number: 7R01CA048061-20 Interpret this number
Primary Investigator: Ryan, Louise
Organization: Commonwealth Sci & Ind Res Org
Project Title: Biostatistical Topics in Carcinogenicity and Teratology
Fiscal Year: 2009


Abstract

DESCRIPTION (provided by applicant): This is a first revision of the fifth competitive renewal of a grant whose purpose is to conduct applied statistical research motivated by epidemiological studies related to carcinogenicity and adverse birth and reproductive outcomes. Studies designed to assess the health impact of environmental exposures are the primary emphasis. Specific Aims are: 1. To develop, implement and evaluate strategies for efficient sub-sampling from repeated measures and longitudinal studies where resource limitations preclude measuring exposures of interest on all study participants at all follow-up times. In particular, a. To develop, extend and apply longitudinal case control study designs for longitudinal birth cohorts and to use these methods as the basis for optimal designs that involve subsampling from a longitudinal cohort; b. To develop and evaluate an efficient design and analysis for a reproductive toxicology study wherein pregnancy may fail at any of a number of different points in gestation. 2. To develop and evaluate a broad class of penalized latent variable models for the analysis of high dimensional exposure and response data. In particular, a. To develop penalized item response theory (IRT) models and use them to characterize the relationship between a moderate number of related binary exposures and a binary response variable; b. To extend penalized latent class models to incorporate exposure/response relationships, including gene-environment interactions, in studies involving a moderate number of genetic markers; and c. To extend the methods developed in Aims 2a and 2b to apply in truly high dimensional settings. 3. To extend, evaluate and apply methods for assessing goodness-of-fit for correlated data and latent variable models via the use of Cholesky residuals.



Publications

Meta-analysis For Rare Events
Authors: Cai,T. , Parast,L. , Ryan,L. .
Source: Statistics In Medicine, 2010-09-10 00:00:00.0; 29(20), p. 2078-89.
PMID: 20623822
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A Maximum Likelihood Latent Variable Regression Model For Multiple Informants
Authors: Horton,N.J. , Roberts,K. , Ryan,L. , Suglia,S.F. , Wright,R.J. .
Source: Statistics In Medicine, 2008-10-30 00:00:00.0; 27(24), p. 4992-5004.
PMID: 18613227
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A Simulation Study Of Quantitative Risk Assessment For Bivariate Continuous Outcomes
Authors: Yu,Z.F. , Catalano,P.J. .
Source: Risk Analysis : An Official Publication Of The Society For Risk Analysis, 2008 Oct; 28(5), p. 1415-30.
PMID: 18631306
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Combining Data From Multiple Sources, With Applications To Environmental Risk Assessment
Authors: Ryan,L. .
Source: Statistics In Medicine, 2008-02-28 00:00:00.0; 27(5), p. 698-710.
PMID: 18069727
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Model-based Clustering Of Dna Methylation Array Data: A Recursive-partitioning Algorithm For High-dimensional Data Arising As A Mixture Of Beta Distributions
Authors: Houseman E.A. , Christensen B.C. , Yeh R.F. , Marsit C.J. , Karagas M.R. , Wrensch M. , Nelson H.H. , Wiemels J. , Zheng S. , Wiencke J.K. , et al. .
Source: Bmc Bioinformatics, 2008; 9, p. 365.
PMID: 18782434
Related Citations

Penalized Item Response Theory Models: Application To Epigenetic Alterations In Bladder Cancer
Authors: Houseman,E.A. , Marsit,C. , Karagas,M. , Ryan,L.M. .
Source: Biometrics, 2007 Dec; 63(4), p. 1269-77.
PMID: 17484774
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Using Wavelet-based Functional Mixed Models To Characterize Population Heterogeneity In Accelerometer Profiles: A Case Study
Authors: Morris J.S. , Arroyo C. , Coull B.A. , Ryan L.M. , Herrick R. , Gortmaker S.L. .
Source: Journal Of The American Statistical Association, 2006-12-01 00:00:00.0; 101(476), p. 1352-1364.
PMID: 19169424
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Individual And Population Penalized Regression Splines For Accelerated Longitudinal Designs
Authors: Harezlak,J. , Ryan,L.M. , Giedd,J.N. , Lange,N. .
Source: Biometrics, 2005 Dec; 61(4), p. 1037-48.
PMID: 16401277
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Quantitative Risk Assessment For Multivariate Continuous Outcomes With Application To Neurotoxicology: The Bivariate Case
Authors: Yu,Z.F. , Catalano,P.J. .
Source: Biometrics, 2005 Sep; 61(3), p. 757-66.
PMID: 16135027
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On The Use Of Biomarkers For Environmental Health Research
Authors: Ryan L. , Huang W. , Thurston S.W. , Kelsey K.T. , Wiencke J.K. , Christiani D.C. .
Source: Statistical Methods In Medical Research, 2004 Jun; 13(3), p. 207-25.
PMID: 15198487
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Modeling Spatial Survival Data Using Semiparametric Frailty Models
Authors: Li Y. , Ryan L. .
Source: Biometrics, 2002 Jun; 58(2), p. 287-97.
PMID: 12071401
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A Local Likelihood Proportional Hazards Model For Interval Censored Data
Authors: Betensky R.A. , Lindsey J.C. , Ryan L.M. , Wand M.P. .
Source: Statistics In Medicine, 2002-01-30 00:00:00.0; 21(2), p. 263-75.
PMID: 11782064
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Synthesis Of Evidence From Epidemiological Studies With Interval-censored Exposure Due To Grouping
Authors: Cook R.J. , Brumback B.B. , Wigg M.B. , Ryan L.M. .
Source: Biometrics, 2001 Sep; 57(3), p. 671-80.
PMID: 11550914
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An Exact Trend Test For Correlated Binary Data
Authors: Corcoran C. , Ryan L. , Senchaudhuri P. , Mehta C. , Patel N. , Molenberghs G. .
Source: Biometrics, 2001 Sep; 57(3), p. 941-8.
PMID: 11550948
Related Citations

Anticonvulsant Teratogenesis 4: Inter-rater Agreement In Assessing Minor Physical Features Related To Anticonvulsant Therapy
Authors: Carlin J.B. , Ryan L.M. , Harvey E.A. , Holmes L.B. .
Source: Teratology, 2000 Dec; 62(6), p. 406-12.
PMID: 11091362
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Semiparametric Regression Analysis Of Interval-censored Data
Authors: Goetghebeur E. , Ryan L. .
Source: Biometrics, 2000 Dec; 56(4), p. 1139-44.
PMID: 11129472
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Fitting Nonlinear And Constrained Generalized Estimating Equations With Optimization Software
Authors: Contreras M. , Ryan L.M. .
Source: Biometrics, 2000 Dec; 56(4), p. 1268-71.
PMID: 11129490
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Particle Concentrations In Urban Microenvironments
Authors: Levy J.I. , Houseman E.A. , Ryan L. , Richardson D. , Spengler J.D. .
Source: Environmental Health Perspectives, 2000 Nov; 108(11), p. 1051-7.
PMID: 11102296
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Risk Of Internal Cancers From Arsenic In Drinking Water
Authors: Morales K.H. , Ryan L. , Kuo T.L. , Wu M.M. , Chen C.J. .
Source: Environmental Health Perspectives, 2000 Jul; 108(7), p. 655-61.
PMID: 10903620
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A scaled linear mixed model for multiple outcomes.
Authors: Lin X. , Ryan L. , Sammel M. , Zhang D. , Padungtod C. , Xu X. .
Source: Biometrics, 2000 Jun; 56(2), p. 593-601.
PMID: 10877322
Related Citations

Adverse Effects Of Chorionic Villus Sampling: A Meta-analysis
Authors: Brumback B.A. , Holmes L.B. , Ryan L.M. .
Source: Statistics In Medicine, 1999-08-30 00:00:00.0; 18(16), p. 2163-75.
PMID: 10441771
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Cardiovascular Malformations: Changes In Prevalence And Birth Status, 1972-1990
Authors: Lin A.E. , Herring A.H. , Amstutz K.S. , Westgate M.N. , Lacro R.V. , Al-Jufan M. , Ryan L. , Holmes L.B. .
Source: American Journal Of Medical Genetics, 1999-05-21 00:00:00.0; 84(2), p. 102-10.
PMID: 10323733
Related Citations

Local Em Estimation Of The Hazard Function For Interval-censored Data
Authors: Betensky R.A. , Lindsey J.C. , Ryan L.M. , Wand M.P. .
Source: Biometrics, 1999 Mar; 55(1), p. 238-45.
PMID: 11318161
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Statistical Methods For Developmental Toxicity. Analysis Of Clustered Multivariate Binary Data
Authors: Ryan L. , Molenberghs G. .
Source: Annals Of The New York Academy Of Sciences, 1999; 895, p. 196-211.
PMID: 10676418
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Testing For Trend With Count Data
Authors: Weller E.A. , Ryan L.M. .
Source: Biometrics, 1998 Jun; 54(2), p. 762-73.
PMID: 9629655
Related Citations

Tutorial In Biostatistics Methods For Interval-censored Data
Authors: Lindsey J.C. , Ryan L.M. .
Source: Statistics In Medicine, 1998-01-30 00:00:00.0; 17(2), p. 219-38.
PMID: 9483730
Related Citations

A Semiparametric Approach To Risk Assessment For Quantitative Outcomes
Authors: Bosch R.J. , Wypij D. , Ryan L.M. .
Source: Risk Analysis : An Official Publication Of The Society For Risk Analysis, 1996 Oct; 16(5), p. 657-65.
PMID: 8962516
Related Citations

Latent Variable Models With Fixed Effects
Authors: Sammel M.D. , Ryan L.M. .
Source: Biometrics, 1996 Jun; 52(2), p. 650-63.
PMID: 8672706
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A Comparison Of Continuous- And Discrete- Time Three-state Models For Rodent Tumorigenicity Experiments
Authors: Lindsey J.C. , Ryan L.M. .
Source: Environmental Health Perspectives, 1994 Jan; 102 Suppl 1, p. 9-17.
PMID: 8187731
Related Citations

Using Historical Controls In The Analysis Of Developmental Toxicity Data
Authors: Ryan L. .
Source: Biometrics, 1993 Dec; 49(4), p. 1126-35.
PMID: 8117906
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Global Tests For Multiple Binary Outcomes
Authors: Lefkopoulou M. , Ryan L. .
Source: Biometrics, 1993 Dec; 49(4), p. 975-88.
PMID: 8117908
Related Citations

Statistical Model For Fetal Death, Fetal Weight, And Malformation In Developmental Toxicity Studies
Authors: Catalano P.J. , Scharfstein D.O. , Ryan L.M. , Kimmel C.A. , Kimmel G.L. .
Source: Teratology, 1993 Apr; 47(4), p. 281-90.
PMID: 8322222
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The Use Of Generalized Estimating Equations For Risk Assessment In Developmental Toxicity
Authors: Ryan L. .
Source: Risk Analysis : An Official Publication Of The Society For Risk Analysis, 1992 Sep; 12(3), p. 439-47.
PMID: 1410710
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Statistical Properties Of The Noael
Authors: Leisenring W. , Ryan L. .
Source: Regulatory Toxicology And Pharmacology : Rtp, 1992 Apr; 15(2 Pt 1), p. 161-71.
PMID: 1626067
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Quantitative Risk Assessment For Developmental Toxicity
Authors: Ryan L. .
Source: Biometrics, 1992 Mar; 48(1), p. 163-74.
PMID: 1581483
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Relationship Between Fetal Weight And Malformation In Developmental Toxicity Studies
Authors: Ryan L.M. , Catalano P.J. , Kimmel C.A. , Kimmel G.L. .
Source: Teratology, 1991 Aug; 44(2), p. 215-23.
PMID: 1925981
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Adjusting For Age-related Competing Mortality In Long-term Cancer Clinical Trials
Authors: Cheuvart B. , Ryan L. .
Source: Statistics In Medicine, 1991 Jan; 10(1), p. 65-77.
PMID: 2006357
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Survival Analysis In Natural History Studies Of Disease
Authors: Cnaan A. , Ryan L. .
Source: Statistics In Medicine, 1989 Oct; 8(10), p. 1255-68.
PMID: 2814073
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