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Grant Details

Grant Number: 2R01CA095747-05A2 Interpret this number
Primary Investigator: Li, Yi
Organization: Dana-Farber Cancer Inst
Project Title: Community-Based Studies in Cancer and Environment
Fiscal Year: 2008


Abstract

DESCRIPTION (provided by applicant): This is a renewal application for methodological research in statistical issues related to community-based or observational studies in cancer and environmental epidemiology. A general class of semiparametric transformation models is proposed for multivariate survival data, providing a unified likelihood framework that allows the regression coefficients to have population-level interpretations and the dependence parameters to be conveniently modeled. Specifically, the principal investigator plans to develop: (1) Semiparametric normal transformation Cox models for multivariate survival data: Flexible modeling of pairwise dependence will be developed and a new class of marginalized frailty models will be proposed. Semiparametric maximum likelihood estimation approach will be investigated. We will further consider generalized semiparametric normal transformation survival models, encompassing the proportional hazards and the proportional odds models as special cases; (2) Accelerated semiparametric normal transformation models for multivariate survival data: We will propose a new semiparametric normal transformation AFT model by exploring the mean structure of the failure times. We will develop consistent and numerically stable inference procedures, and investigate their large sample results; (3) Multivariate survival models with nonnegligible cure fractions: Two new classes of models, semiparametric frailty cure models and semiparametric normal transformation cure models will be proposed. Theoretical properties for both classes of models will be explored and feasible inference procedures will be investigated. The extension to a spatial setting will be considered; (4) Clustered recurrent event models with covariate measurement errors and delayed entry: two new classes of recurrent event models will be proposed to account for within-cluster correlations, mismeasured covariates and delayed entry. Properties of the models will be investigated and various inference procedures will be proposed. Empirical data analyses will play a central role in all the specific aims. Available data stem from several cancer and environmental health projects that the principal investigator has been involved in, namely, the NCI-funded Cancer Care Outcomes Research and Surveillance Consortium (CanCORS), the Young Worker Smoking Cessation Intervention study (a randomized community-based cancer prevention trial), the NIH SEER cancer incidence database, the West Kenya Malaria Study and the Home Allergen Study. Although motivated by applied problems, the proposed research offers useful contributions to general statistical theory and methodology in survival analysis, multivariate statistical analysis, cure models and measurement error modeling.



Publications

Ultrahigh dimensional time course feature selection.
Authors: Xu P. , Zhu L. , Li Y. .
Source: Biometrics, 2014 Jun; 70(2), p. 356-65.
PMID: 24571586
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The Dantzig Selector for Censored Linear Regression Models.
Authors: Li Y. , Dicker L. , Zhao S.D. .
Source: Statistica Sinica, 2014-01-01 00:00:00.0; 24(1), p. 251-2568.
PMID: 24478569
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Analysis Of Ordinal Outcomes With Longitudinal Covariates Subject To Missingness
Authors: Goodman M.S. , Li Y. , Stoddard A.M. , Sorensen G. .
Source: Journal Of Applied Statistics, 2014-01-01 00:00:00.0; 41(5), p. 1040-1052.
PMID: 24791038
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Joint Modeling of Longitudinal and Cure-survival Data.
Authors: Kim S. , Zeng D. , Li Y. , Spiegelman D. .
Source: Journal Of Statistical Theory And Practice, 2013-04-01 00:00:00.0; 7(2), p. 324-344.
PMID: 23926445
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A Regularization Corrected Score Method For Nonlinear Regression Models With Covariate Error
Authors: Zucker D.M. , Gorfine M. , Li Y. , Tadesse M.G. , Spiegelman D. .
Source: Biometrics, 2013 Mar; 69(1), p. 80-90.
PMID: 23379851
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Spatial Cluster Detection For Longitudinal Outcomes Using Administrative Regions
Authors: Cook A.J. , Gold D.R. , Li Y. .
Source: Communications In Statistics: Theory And Methods, 2013-01-01 00:00:00.0; 42(12), p. 2105-2117.
PMID: 23847392
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Variable Selection For Censored Quantile Regresion
Authors: Wang H.J. , Zhou J. , Li Y. .
Source: Statistica Sinica, 2013-01-01 00:00:00.0; 23(1), p. 145-167.
PMID: 23847407
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Joint Models of Longitudinal Data and Recurrent Events with Informative Terminal Event.
Authors: Kim S. , Zeng D. , Chambless L. , Li Y. .
Source: Statistics In Biosciences, 2012-11-01 00:00:00.0; 4(2), p. 262-281.
PMID: 23227131
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Nonparametric Diagnostic Test For Conditional Logistic Regression
Authors: Goodman M.S. , Li Y. .
Source: Journal Of Biometrics & Biostatistics, 2012-03-01 00:00:00.0; 3(2), .
PMID: 23869287
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Principled Sure Independence Screening For Cox Models With Ultra-high-dimensional Covariates
Authors: Zhao S.D. , Li Y. .
Source: Journal Of Multivariate Analysis, 2012-02-01 00:00:00.0; 105(1), p. 397-411.
PMID: 22408278
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Auc-based Biomarker Ensemble With An Application On Gene Scores Predicting Low Bone Mineral Density
Authors: Zhao X.G. , Dai W. , Li Y. , Tian L. .
Source: Bioinformatics (oxford, England), 2011-11-01 00:00:00.0; 27(21), p. 3050-5.
PMID: 21908541
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Weight-bearing Asymmetry During Sit-stand Transitions Related To Impairment And Functional Mobility After Total Knee Arthroplasty
Authors: Christiansen,C.L. , Bade,M.J. , Judd,D.L. , Stevens-Lapsley,J.E. .
Source: Archives Of Physical Medicine And Rehabilitation, 2011 Oct; 92(10), p. 1624-9.
PMID: 21839986
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A Weighted-least-squares Estimation Approach To Comparing Trends In Age-adjusted Cancer Rates Across Overlapping Regions
Authors: Walters K.A. , Li Y. , Tiwari R.C. , Zou Z. .
Source: Journal Of Data Science : Jds, 2011-10-01 00:00:00.0; 8(4), p. 631-644.
PMID: 22375146
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A New Class Of Minimum Power Divergence Estimators With Applications To Cancer Surveillance
Authors: Martín N. , Li Y. .
Source: Journal Of Multivariate Analysis, 2011-09-01 00:00:00.0; 102(8), p. 1175-1193.
PMID: 22368308
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Estimating Subject-specific Dependent Competing Risk Profile With Censored Event Time Observations
Authors: Li,Y. , Tian,L. , Wei,L.J. .
Source: Biometrics, 2011 Jun; 67(2), p. 427-35.
PMID: 20618311
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Survival Analysis With Error-prone Time-varying Covariates: A Risk Set Calibration Approach
Authors: Liao,X. , Zucker,D.M. , Li,Y. , Spiegelman,D. .
Source: Biometrics, 2011 Mar; 67(1), p. 50-8.
PMID: 20486928
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Detecting Multiple Change Points In Piecewise Constant Hazard Functions
Authors: Goodman M.S. , Li Y. , Tiwari R.C. .
Source: Journal Of Applied Statistics, 2011-01-01 00:00:00.0; 38(11), p. 2523-2532.
PMID: 22707842
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Multiple Comparison Of Trends In Cancer Rates Taking Into Account Overlapping Cases()
Authors: Martín N. , Li Y. .
Source: Understanding Complex Systems, 2011; 72, p. 485-494.
PMID: 23060943
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A Gaussian Copula Model For Multivariate Survival Data
Authors: Othus M. , Li Y. .
Source: Statistics In Biosciences, 2010 Dec; 2(2), p. 154-179.
PMID: 22162742
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Weight-bearing Asymmetry In Relation To Measures Of Impairment And Functional Mobility For People With Knee Osteoarthritis
Authors: Christiansen,C.L. , Stevens-Lapsley,J.E. .
Source: Archives Of Physical Medicine And Rehabilitation, 2010 Oct; 91(10), p. 1524-8.
PMID: 20875509
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Spatial Cluster Detection For Weighted Outcomes Using Cumulative Geographic Residuals
Authors: Cook A.J. , Li Y. , Arterburn D. , Tiwari R.C. .
Source: Biometrics, 2010 Sep; 66(3), p. 783-92.
PMID: 19751250
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Interval Estimation For Ratios Of Correlated Age-adjusted Rates
Authors: Tiwari R.C. , Li Y. , Zou Z. .
Source: Journal Of Data Science : Jds, 2010 Jul; 8, p. 471-482.
PMID: 22347884
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Spatial Cluster Detection For Repeatedly Measured Outcomes While Accounting For Residential History
Authors: Cook A.J. , Gold D.R. , Li Y. .
Source: Biometrical Journal. Biometrische Zeitschrift, 2009 Oct; 51(5), p. 801-18.
PMID: 19760635
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A Novel Application Of A Bivariate Regression Model For Binary And Continuous Outcomes To Studies Of Fetal Toxicity
Authors: Najita J.S. , Li Y. , Catalano P.J. .
Source: Journal Of The Royal Statistical Society. Series C, Applied Statistics, 2009-09-01 00:00:00.0; 58(4), p. 555-573.
PMID: 20357904
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A Class Of Semiparametric Mixture Cure Survival Models With Dependent Censoring
Authors: Othus M. , Li Y. , Tiwari R.C. .
Source: Journal Of The American Statistical Association, 2009-09-01 00:00:00.0; 104(487), p. 1241-1250.
PMID: 20706564
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A Note On Optimal Weights And Variable Selections For Multivariate Survival Data
Authors: Dave Z.S. , Yi L. .
Source: Science In China. Series A, Mathematics, Physics, Astronomy / Chinese Academy Of Sciences, 2009 Jun; 52(6), p. 1131-1133.
PMID: 20414478
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Survival Analysis With High-dimensional Covariates: An Application In Microarray Studies
Authors: Engler,D. , Li,Y. .
Source: Statistical Applications In Genetics And Molecular Biology, 2009; 8(1), p. Article 14.
PMID: 19222381
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Comparing Trends In Cancer Rates Across Overlapping Regions
Authors: Li,Y. , Tiwari,R.C. .
Source: Biometrics, 2008 Dec; 64(4), p. 1280-6.
PMID: 18371122
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Semiparametric Maximum Likelihood Estimation In Normal Transformation Models For Bivariate Survival Data
Authors: Li Y. , Prentice R.L. , Lin X. .
Source: Biometrika, 2008 Dec; 95(4), p. 947-960.
PMID: 19079778
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Rejoinder To ``asymptotic Distribution Of Score Statistics For Spatial Cluster Detection With Censored Data"
Authors: Cook A.J. , Li Y. .
Source: Biometrics, 2008 Dec; 64(4), p. 1289-1292.
PMID: 22573915
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An Age-stratified Poisson Model For Comparing Trends In Cancer Rates Across Overlapping Regions
Authors: Li,Y. , Tiwari,R.C. , Zou,Z. .
Source: Biometrical Journal. Biometrische Zeitschrift, 2008 Aug; 50(4), p. 608-19.
PMID: 18615411
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Bayesian Hidden Markov Modeling Of Array Cgh Data
Authors: Guha S. , Li Y. , Neuberg D. .
Source: Journal Of The American Statistical Association, 2008-06-01 00:00:00.0; 103(482), p. 485-497.
PMID: 22375091
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Spatial Cluster Detection For Censored Outcome Data
Authors: Cook A.J. , Gold D.R. , Li Y. .
Source: Biometrics, 2007 Jun; 63(2), p. 540-9.
PMID: 17688506
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An Evaluation Of Multiple Behavioral Risk Factors For Cancer In A Working Class, Multi-ethnic Population
Authors: Goodman M.S. , Li Y. , Bennett G.G. , Stoddard A.M. , Emmons K.M. .
Source: Journal Of Data Science : Jds, 2006-07-01 00:00:00.0; 4(3), p. 291-306.
PMID: 23227033
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